Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRNVRAYQDRGLLPPPERRGRVGVYFDSHLKRLRLISQLLERGYSSANIKELLEAWEQGRDLDHVLGLDQAIIGEWNLETPGSIGFDELQAIFGDELNDRVIDKAQALGLLLFDG---ER---MKIPSPRLFQAGLELYRSGIPLEALLDQLGELRSDTEHLAAGIVRLIVTHLVDGRGTDLLPGAPDLQELAKVFLRLRPLAEHVVQVELARGLKLSANEMLGERVGEMLRKLEKPS |
| 1R8D Chain:A ((2-72)) | ----------------------------------------------------------------------------------KYQVKQVAEISGV--SIRTLHHYDNIELLNPSALTDAGYRLYSDADLERLQQILFFKEIGFRLDEIKEMLDHP----------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32129 for 406 contacts (-79.1/contact) +
2D Compatibility (PS) -7362 + (NN) -2776 + (LL) 11964
1D Compatibility (HY) -2800 + (ID) 500
Total energy: -33603.0 ( -82.77 by residue)
QMean score : 0.654
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