Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPKSFRHLVQALACLALLASASLQAQESRLDRILESGVLRVATTGDYKPFSYRTEEGGYAGFDVDMAQRLAESLGAKLVVVPTSWPNLMRDFADDRFDIAMSGISINLERQRQAYFSIPYLRDGKTPITLCSEEARFQTLEQIDQPGVTAIVNPGGTNEKFARANLKKARILVHPDNVTIFQQIVDGKADLMMTDAIEARLQSRLHPE-LCAVHPQQPFDFAEKAYLLP-RDEAFKRYVDQWLHIAEQSGLLRQRMEHWLEYRWPTAHGK |
3I6V Chain:A ((6-220)) | -------------------------------------TVRMGTEGAYPPYNFINDAGEVDGFERELGDELCKRAGLTCEWVKNDWDSIIPNLVSGNYDTIIAGMSITDERDEVIDFTQNYIPPTASSYVATSD------GADLSG--I-VAAQTATIQAGYIAE--SGATLVEFATPEETIAAVRNGEADAVFADRDYLVPIVAESGGELMFVGDD-VPLGGGVGMGLRESDGELRGKFDAAITSMKEDGTLNTMIKKWFGEDA------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108852 for 1749 contacts (-62.2/contact) +
2D Compatibility (PS) -23627 + (NN) -10135 + (LL) 4112
1D Compatibility (HY) -6000 + (ID) 1700
Total energy: -146202.0 ( -83.59 by residue)
QMean score : 0.443
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