Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVILLGAPGAGKGTQARFITEKFGIPQISTGDMLRAAVKAGSPLGQQVKGVMDSGGLVSDDIIIALIKERITEADCAKGFLFDGFPRTIPQAEALK----DAGVTIDHVVEIAVDDEEIVSRIAGRRVHPASGRVYHTEHNPPKVAGKDDVTGEELIQREDDKEETVRHRLSVYHSQTKPLVDFYQKLSAAEGTPKYHSIAGVGSVEQITAKVLSALS
1ZIN Chain:A ((1-188))
MNLVLMGLPGAGKGTQAEKIVAAYGIPHISTGDMFRAAMKEGTPLGLQAKQYMDRGDLVPDEVTIGIVRERLSKDDCQNGFLLDGFPRTVAQAEALETMLADIGRKLDYVIHIDVRQDVLMERLTGRRICRNCGATYHLIFHPPAKPGVCDKCGGELYQRADDNEATVANRLEVNMKQMKPLVDFYEQ-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1ZIN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58621 for 1343 contacts (-43.6/contact) +
2D Compatibility (PS) -20186 + (NN) -11247 + (LL) 2132
1D Compatibility (HY) -16000 + (ID) 4750
Total energy: -108672.0 ( -80.92 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_1ZIN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZIN-query.scw
PDB file :
Tito_Scwrl_1ZIN.pdb
: