Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRLLVLFCCLWLLPGVASAAPS-----------VGEIRVVSETWTRYTQEDGRGVAWDLLRAVYEPAGVRLRIA-----------------NEPYTRAVGLVLRGEADAWVGAYRGEIDEALYPRW--PYDVDPIAVLSLKDNPPPP------LEGLSRFRLSWMRGYAFARYFPTLTPHSELQRR---------TSALPMLLNHRVDYFIDSRPELEEMLAGAGALAAEYRITDVTRLPLYLGFSDSPRGRELLALFDRRMRQLHASGELERIFARWNWPYAPLKAILPPKE |
1PB7 Chain:A ((4-292)) | TRLKIVTIHQEPFVYVKPTMSDGTCKEEFTVNGDPVKKVICTGPNHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKGTRITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMR-----KDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDS------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PB7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137011 for 1757 contacts (-78.0/contact) +
2D Compatibility (PS) -25773 + (NN) -10147 + (LL) 272
1D Compatibility (HY) -7200 + (ID) 1700
Total energy: -181559.0 ( -103.33 by residue)
QMean score : 0.263
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