Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQANELLIGAGPDGQPVGQAWRLANRHGLIAGATGTGKTVTLQHLAESFSDAGVAVFAADIKGDLCGIAAPGNPQGKVAERIASMPWLNYQPKAYPTTLWDIAGKTGHPLRTTISEMGPLLLAN-LLELTDSQQAALFAAFQVADREGLLLLDLKDLKALL---------NHLKDNPEILGEDRALFTGASGQALLRRLATLEQQGAEAFF-G-EPALQLEDILRPEPDGRGRIHLLDASRLVHEAPKVYATFLLWLLAELFEQLPERGDADKPVLALFFDEAHLLFNGTPKALRDRLEQVVRLIRSKGVGVYFVTQSPGDLPD--------DVLAQLGLRIQHGLRAFTAKEQKSLRAVADGFRPNPA------------FDTLGVLTELGIGEALVGTLEEKGTPAMVQRVAVAPPYSRIGPLSDSERAELVQRSPLKGRYDQPIDRESAYEVLANKAGAKPEVQGQATAQQESSSGVGGMAGQILGSLLSNSTVKSAMRQAANQLSRELVRGLLGSLMGGKKRR |
| 1E9R Chain:A ((45-410)) | -----------------VPMPRDAEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDMLSKFGRD----------KDIILNPYDQRTKGWSFFNEIRND-YDWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGT--PSMRELFHWTTIATFDDLRGFLEGTLAE--SLFAG--SNEASKALTSARFVLSDKLPEHVTMPDGDFSIRSWLED---PNGGNLFITWREDM---GPALRPLISAWVDVVCTSILSLPEEPKRRLWLFIDELASLEKL------ASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVL--GGS-RTDPKTNEDMSLSLGEHEVERDRALERVRERVVMPAEIANLPDLTAYVGFA------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143574 for 2625 contacts (-54.7/contact) +
2D Compatibility (PS) -34539 + (NN) -14456 + (LL) 9120
1D Compatibility (HY) -6000 + (ID) 2550
Total energy: -191999.0 ( -73.14 by residue)
QMean score : 0.429
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