Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------MPLLDYL--ASHPLAFVLCTILLGL-LVGSFLNVVVHRLPKMMERNWKAEARE-----------ALGL-EPEPKQATYNLVLPNSACPRCGHEIRPWE---NIPLVSYLALGGKCSSCKAAIGKRYPLVELATALLSGYVAWHFG--FTWQAGAMLLLTWGLLAMSLIDADHQLLPDVLVLPLLWLGLIANHFGLFASLDDALFGAVFGYLSLWSVFWLFKLVTGKEGMGYGDFKLLAMLGAWGGWQILPLTILLSSLVGAILGVIMLRLRNAESGTPIPFGPYLAIAGWIALLWGDQITRTYLQFAGFK--------------------------------------------------------------------------------- |
| 4KKI Chain:A ((24-434)) | EICEVSEENYIRLKPLLNTMIQSNYNRGTSAVNVVLSLKLVGIQIQTLMQKMIQQIKYNVKSRLSDVSSGELALIILALGVCRNAEENLIYDYHLIDKLENKFQAEIENMEAHNGTPLTNYYQLSLDVLALCLFNGN-YSTAEVVNHFTPENKNYYFGSQFSVDTGAMAVLALTCVKKSLINGQIKADEGSLKNISIYTKSLVEKI-LSEKKENGLIGNTFSTGEAMQALFVSSDYYNENDWNCQQTLNTVLTEISQG--AFSNPNAAAQVLPALMGKTFLDI-NKDSSCVSASGNF-NIQSYISVNYSVRINETYFTNVTVLNGSVFLSVMEKAQKMNDTIFGFTMEERSWGPYITCIQGLCANNNDRTYWELLSGGEPLSQGAGSYVVRNGENLEVRWSKYL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KKI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -284199 for 2138 contacts (-132.9/contact) +
2D Compatibility (PS) -29212 + (NN) -7135 + (LL) 480
1D Compatibility (HY) -10400 + (ID) 2600
Total energy: -333066.0 ( -155.78 by residue)
QMean score : 0.253
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