Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFNTEVQPGICMEPDAITQEYVFNHTMLRVKDPKRSLDFYSRVLGMRLLRRLDFEEGRFSLYFLAMTRGEEVPDAVDERQRYTFGRQSVLELTHNWGSESDDSQYHNGNQDPRGFGHICFSVPDLVAACERFETLGVNFVKP---LDRGMKNVAFISDPDGYWVEIVQASLNGEMGRG
4MTT Chain:B ((5-125))
-------------------------HSMLRVADLEAALEFYTRALDMRLLRRRDYPEGRFTLAFVGYQ---------DERA------AAALELTHNW----DRDGYTQGD----GYGHLAIEVEDAAVTCARARALGYRVTREAGLMQHGRSVIAFLEDPDGYKVELIQ----------
General information:
TITO was launched using:
RESULT:
Template:
4MTT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68726 for 793 contacts (-86.7/contact) +
2D Compatibility (PS) -12908 + (NN) -3641 + (LL) 2444
1D Compatibility (HY) -10000 + (ID) 2800
Total energy: -95631.0 ( -120.59 by residue)
QMean score : 0.492
(partial model without unconserved sides chains):
PDB file :
Tito_4MTT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MTT-query.scw
PDB file :
Tito_Scwrl_4MTT.pdb
: