Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRMALKPLVAACLLASLSTAPQAAPSPYSTLVVFGDSLSDAGQFPDPAGPAGSTSRFTNRVGPTYQNGSGEIFGPTAPMLLGNQLGIAPGDLAASTSPVNAQQGIADGNNWAVGGYRTDQIYDSITAANGSLIERDNTLLRSRDGYLVDRARQGLGADPNALYYITGGGNDFLQGRILNDVQAQQAAGRLVDSVQALQQAG-ARYIVVWLLPDLGLTPATFGGPLQPFASQLSGTFNAELTAQLSQA---GANVIPLNIPLLLKEGMANPASFGLAADQNLIGTCFSGNGCTMNPTYGINGSTPDPSKLLFNDSVHPTITGQRLIADYTYSLLSAPWELTLLPEMAHGTLRAYQDELRSQWQADWENWQNVGQWRGFVGGGGQRLDFDSQDSAASGDGNGYNLTLGGSYRIDEAWRAGVAAGFYRQKLEAGAKDSDYRMNSYMASAFVQYQENRWWADAALTGGYLDYDDLKRKFALGGGERSEKGDTNGHLWAFSARLGYDIAQQADSPWHLSPFVSADYARVEVDGYSEKGASATALDYDDQKRSSKRLGAGLQGKYAFGSDTQLFAEYAHEREYEDDTQDLTMSLNSLPGNRFTLEGYTPQDHLNRVSLGFSQKLAPELSLRGGYNWRKGEDDTQQSVSLALSLDF |
| 3X0H Chain:A ((81-201)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------KPDIVQFMLGTNDVNIGHR----NADSIIGSYTIMLNAMRAANPRVKVIVDKIIPTSWSD------------ATIEAVNTAIPGWVQQQTTAESPVVIADCSRAAGF----------------------------------------TNDMLRDDGVHPNSKGDQFIAGQIGPKLIQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3X0H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -54895 for 845 contacts (-65.0/contact) +
2D Compatibility (PS) -12899 + (NN) -6293 + (LL) 22192
1D Compatibility (HY) -2400 + (ID) 1050
Total energy: -55345.0 ( -65.50 by residue)
QMean score : 0.390
|
|
|