Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTALNVLIYPDDHLKVVCEPVTKVNDAIRKIVDDMFDTMYQEKGIGLAAPQVDILQRIITIDVEGDKQ--NQFVLINPEILASEGET-GIEEGCLSIPGFRALVPRKEKVTVRALDRDGKEFTLDADGLLAICIQHEIDHLNGILFVDYLSPLKRQRIKEKLIKYKKQIAKS
4DR8 Chain:A ((16-178))
KPPLDLHYLGDRVLRQPAKRVSRIDDELRQTIRQMLQTMYSADGIGLAAPQVGINKQLIVIDLELEDEQAPPLVLINPKIERTAGDLEQCQEGCLSIPGVYLDVERPEIVEVSYKDENGRPQRLVADGLLARCIQHEMDHLNGVLFVDRVENRLEL--NEALDKK-------
General information:
TITO was launched using:
RESULT:
Template:
4DR8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100170 for 1200 contacts (-83.5/contact) +
2D Compatibility (PS) -16953 + (NN) -3834 + (LL) 936
1D Compatibility (HY) -12400 + (ID) 3500
Total energy: -135921.0 ( -113.27 by residue)
QMean score : 0.505
(partial model without unconserved sides chains):
PDB file :
Tito_4DR8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DR8-query.scw
PDB file :
Tito_Scwrl_4DR8.pdb
: