Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------MGDELAPCPV--GTTAWPALIQLISKTPCMPQAASNTSL--GLGDLRVPSSMLYWLFLPSSLLAAATLAVSPLLLVTI-------LRNQRLRQEPHYLLPANIL------LSDLAYILLHM-----------LISSSSLGGW---------ELGRMACGILTDAVFAACTSTILSFT----AIVLHTYLAVIHPLRYLSFMSHGAAW--KAVALIWLVACCFPTFLI---------WLSKWQDAQLEEQGASYILPPSMGTQPGCGLLVIVTYTSILCVLFLCTALIANCFWRIYAEAKTSGIWGQGYSRARGTLLIHSVLITLYVSTGVVFSLDMVLTRY--HHIDSGTH-------TWLLAANSEVLMMLPRAMLTYLYLLRYRQLLGMVRGHLPSRRHQAIFTIS------------- |
| 4QLA Chain:A ((19-442)) | LDLEEWWGPPELKQKQDTSIKPFEITFSETMVKELKERIKKRRPFAPPLEGVGFKYGFNSKQLDSWLKYWAEEYPFAERQKFLNQYPHFKTNIQGLNIHFMRITPKVPKGVEIVPLLLLHGWPGSVREFYEAIPHLTAVSKDRNFALEIIAPSLPGYGFSDAAVRPGLAAAEVAVIFKNLMARLGYKQYYVQGGDWGALIGSAMATFFPKEIIGFHSNMALTLSPAATFLEFVGALFPSLIVEPELANRLYPLSEKYSTLLEELGYMHIQATK---PDTVGIGLTDSPAGLLAYILEKFSTWTNPDLRSKEDGGLSYRWT-------KDQLIDNLMLYWS-TKSIVTSMRLYAESFSSRHFDLKLDEIQVQVPTWVLQAKHE-LAYQPPCILKMKYPKLVNASVIEDGGHFLAFELPEIFAKDVLKAIGEFRKLKN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QLA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -271281 for 2476 contacts (-109.6/contact) +
2D Compatibility (PS) -34714 + (NN) -1501 + (LL) 828
1D Compatibility (HY) -12800 + (ID) 3150
Total energy: -322618.0 ( -130.30 by residue)
QMean score : 0.223
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