Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGNCSWEAHPGNRNKMCPGLSEAPELYSRGFLTIEQIAMLPPP--AVMNYIFLLLCLCGLVGNGLVLWFFGFSIK-RNPFSIYFLHLASADVGYLF--SKAVFSILNTGGFLGTFADYIRSVCRVLGLCMFLTGVS---LLPAVSAERCASVIFPAWYWRRRPKRLSAVVCALLWVLSLLVTCLHNY-FCVFLGRG----------APGAACRHMDIFLGILLFLLCCPLMVLPCLALILHVECRARRRQ-------RSAKLNHVILAMVSVFLVSSIYLGIDWFLFWVF-QIPAPFPEYVTDLCICINSSA---KPIVYFLAGRDKSQRLWEPLRVVFQRALRDGA-ELGEAGGSTPNTVTMEMQCPPGNAS |
| 1U19 Chain:A ((4-349)) | MNG-------TEGPNFYVPFSNKTGVVRS--PFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYF-----VFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFG-ENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIM--------MNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1U19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -231823 for 2359 contacts (-98.3/contact) +
2D Compatibility (PS) -31992 + (NN) -14382 + (LL) 376
1D Compatibility (HY) -10000 + (ID) 1500
Total energy: -289321.0 ( -122.65 by residue)
QMean score : 0.173
|
|
|