Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------MEQVNKTVVREFVVL---------------GFSSLARLQQLLFVI---------FLLLYLFTLGTNAIIISTIVL-----DRALHTPMYFFLAI-------------LSCSEICYTFVIVPKML-----VDLLSQKKTISFLGCAIQM---FSFL------FFGSSHSFLLAAM-----------------------GYDRYMAICNPLRYSVLMGHGVCMGLMAAACACGFTVSLVTTSLVFHLPFH-SSNQLHHFFCD--ISPVLKLASQHSG-----FSQLVIFMLGVFALVI----PL----------LLILVSYIRIISAILKIP-----SSVGRYK-TFSTCASHLIVVTVHYSC--------------ASFIYLRPKTNYTSSQDTLISVSYTILTPL--FNPMIYSLRNKEFKSALRRTIGQTFYPLS |
| 4L9P Chain:B ((68-519)) | VHPGIPALFREPPLIHDLLSTETTELQSETVNKCLPLLKGIHNSQKGPFNKYGIPALQRKDHLEYLYDSLEDYPASFVALDASRPWMVYWALAGLCLLGEDVTRFRERVISTFTAAQNSTGGIGGGHGQMSHVASSYAAVLSIAMVGGEEAFKLIDRKAMWKWLGKLKQPDGGFTVCEGGEEDVRGAYCAMVVHALLDLPLALPPEAEARQNGLETFTDGLPEYLSRCQTYEGGISGSPGS--EAHGAYAFCALACLCLLGRPEVVVPRYMNIATLLPWLSARQYAPEGGFSGRTNKLVDGCYSHWVGNCWPLVQAALDGTQPLAGPKRSSVGNLYSREGLTRYILSCCQCKLGGLRDKPGKHPDSYHTCYALTGLSTVQYYHYCTDSSVSSKDDFSSAFSWKHDPNFASDGQGSDIGV-FTENDRLVPFHP-IFVIPHKSAEDIRVWFENQSFDL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L9P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -354517 for 2386 contacts (-148.6/contact) +
2D Compatibility (PS) -30703 + (NN) 788 + (LL) 592
1D Compatibility (HY) -11600 + (ID) 2900
Total energy: -398340.0 ( -166.95 by residue)
QMean score : 0.215
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