Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGRGNSTEVTEFHLLGF------GVQHEFQHVLF----IVLLLIYVTSLIGNIGMILLIKTDSRL-------QTPMYFFPQHLAFVDICYTSAI-----------TPKMLQSFTEENNL---ITFRGCVIQFLVYATFATSDCYLLAIMAMDCY-----------VAICKPLRY--PMIMSQTVYIQLVAGSYIIGSINASVHTGFTFSLSFCKSNKINHFFCDGLPILALSCSNIDINIILDVVFVGFDLMFTELVIIFSYIY---------------------IMVTILKMSSTAGRKKSFSTCASHLTAVTIFYGTLSYMYLQPQSNNSQENMKVASIFYGTVIPMLNPLIYSLRNK---EGK-------- |
| 4L9B Chain:A ((2-393)) | VLKGINFPENEASILDLAMQNRSGVLDGMTIDILNTTSNQLALFHGTAVLQGYGIEITGAPDVLVDTTGQSNETMLLCLTIDLNQVNVPSGTAVDYKQIRLEFLDVPTLLKQYWRDHSLHDLIDPRRVISMPLYWITFGQTGTTPLYEQIKSNYIDNSGNPAYGIAARCENFNHFINKVAVQSIPINGVANRPVSSTASQLTNYKVWRNPYLCSQDPRDKFAPDNLVIEEDGIYRIDISGSINIANYTFPARVGGRYFQIVCARNSSANNLAEFGAEQHLPPSGVWTRRVLVGEYTAGMT---EQAFSSVATISLFKGDNFFLQFETGTNTSRDS--AYNNGYGTSGTHLRNFSYTLERVGDLNGTAYYDNGTF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L9B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -241363 for 2105 contacts (-114.7/contact) +
2D Compatibility (PS) -30970 + (NN) 5551 + (LL) 440
1D Compatibility (HY) -4800 + (ID) 2750
Total energy: -273892.0 ( -130.11 by residue)
QMean score : 0.106
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