Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYFPILFFFFLKRCPSYTEPQNLTGVSEFLLLGLSE-------DPELQPVLAGLFLSMYLVTVLGNLLIILAVSSDSHLHTPMYFFLSNLSLADIGFTSTTVPKMIVDMQTHSRVISYEGCLTQMSFFVLFACMDDMLLSVMAYDRFVAICHPLHYRIIMNPRLCGFLILLSFFISLLDSQLHNLIMLQLTCFKDVDISNFFCDPSQLLHLRCSDTFINEMVIYFMGAIFGCLP----ISGILF-----------SYYKIVS-------------PILRVPTSD-----GKYKAFSTCG----SHLAVVCLFYGTGLVGY---LSSAVLPSPRKSMVASV-MYTVVTPMLNPFIYSLRN---KDIQSALCRLHGRIIKSHHLHPFCYMG--------- |
| 1ZY7 Chain:A ((8-402)) | -SRQPIPS----EGLQLHLPQVLADAVSRLVLGKFGDLTDNFSSPHARRKVLAGVVMTTGTDVKDA---KVISVSTGTKCINGEYMSDRGLALND------------CHAEIISRRSLLRFLYTQLELYLNNKDDQKRSIFQKSERGGFRLKENVQFHLYISTSPCGDARIFKARGQLRTKIESGEGTIPVRSNASIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLLSIFVEPIYFSSIILGSLYHGDHLSRAMYQRISNIEDLPPLYTLNKPLLSGISNAEARQPGKAPNFSVNWTVGDSAIEVINATTGKDELGRASRLCKHALYCRWMRVHGKVPSHLLRSKITKPNVYHESKLAAKEYQAAKARLFTAFIKAG-LGAWVEKPTEQDQFSLT |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -293358 for 2553 contacts (-114.9/contact) +
2D Compatibility (PS) -32283 + (NN) 10998 + (LL) 1916
1D Compatibility (HY) -4800 + (ID) 2850
Total energy: -320377.0 ( -125.49 by residue)
QMean score : 0.196
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