Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMEIANVSSPEVFVLLGFSTRPSLETVLFIVVLSFYMVSILGNGIIILVSHTDVHLHTPMYFFLANLPFLDMSFTTSIVPQLLANLWGPQKTISYGGCVVQFYISHWLGATECVLLATMSYDRYAAICRPLHYTVIMHPQLCLGLALASWLGGLTTSMVGSTLTMLLPLCGNNCIDHFFCEMPLIMQLACVDTS----LNEMEMYLASFVFV--VLPLGLILVSYGHIARAV---LKIRSAEGRRKAFNTC-----------SSHVAVVSLFYGSIIFMYLQPAKSTSHEQGKFIALFYTVVTPALNPLIYTLRNTEVKSALRHMVLENCC--GSAGKLAQI-------------------------- |
| 4XNV Chain:A ((38-382)) | -------SFKCALTKTGF-----QFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYP-KSLGRLKKKNAICISVLVWL------IVVVAISPILFYSGTGVRKN--------KTITCYDTTSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPF-HVMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177429 for 1952 contacts (-90.9/contact) +
2D Compatibility (PS) -29510 + (NN) -1268 + (LL) 2096
1D Compatibility (HY) -19200 + (ID) 2550
Total energy: -227861.0 ( -116.73 by residue)
QMean score : 0.097
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