Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASTSN-VTE-LIFTGLFQDPAVQSV--------------CFVVFLPVYLATVVG-NGLIVLTVSISKSLD--SPMYFFLS-CLSLVEI-SYSSTIAPKFIIDLLAKIKTISL-------EGCLTQIFFF-HFFGVAEILLI-----VVMAYDCYVAICK-PL------HYMNIISRQLCHLLVAGSWLGG----------------F-CH----SIIQILVIIQLPFC-GPNVIDH-YFCDLQPLFKLACTDTFMEGVIVLANSGLFS------------------VFSFLILVSSYIVILVNLRNHSAEGRHKALSTCASHITVVILFFGPAIFLYMRPSSTFTEDKLVAVFYTVITPMLNPIIYTLRNAEVKIAIRRLWSKKEN-PGRE |
| 4KQ7 Chain:A ((2-374)) | ---QSNMTNEMFDLAKLKSGVKNKRISSTDPTGGNRDHLEPFKPGEKRIIADIKGMGVINHIWVTIAPPPPTLSRNDIIIRMYWDGNDYPSVESPIGPFFGQGWDERYNYASLPLSAGPENGTGLSCYFAMPFEKGARIEIENQSDRNIDAFYFYVDYLEMAKLPKDMGRFHAWYNHNLTEALPEGETEWGVTGAQKPNTTGERNYVFMETQGKGHFVGINYYVHCPTPMWYGEGDDMWFIDGEKVPSLIGTGTEDFFNTAWCPKEAFSHPYFGYPRVNNDIGWLGRTHVYRFFIEDPIFFEKSLKGTIEHGSNNNLTLDLS--TVAYWYQDSAVALPEAPTKAQRAPK--------------PFINHVDIHRWRDAWRKSKGNKATLWGNE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KQ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -252731 for 1976 contacts (-127.9/contact) +
2D Compatibility (PS) -31477 + (NN) 593 + (LL) 2164
1D Compatibility (HY) -2800 + (ID) 2900
Total energy: -287151.0 ( -145.32 by residue)
QMean score : 0.123
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