Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNSENLTRAAVAPA--EFVLLGITNRWDLRVALFLTCLPVYLVSLLGNMGMALLIRMDARLHTPMYFFLANLSLLDACYSSAIGPKMLVDLLLPRATIPYTACALQMFVFAGLADTECCLLAAMAYDRYVAIRNPLLYTTAMSQRLCLALLGASGLGGAVSAFVHTTLTFRLSFCRSRKINSFFCDIPPLLAISCSDTSLNELLLFAICGFIQTATVLAITVSYGFIAGAVIHMRSVEGSRRAASTGGSHLTAVAMMYGTLIFMYLRPSSSYALDTDKMASVFYTLVIPSLNPLIYSLRNKEVKEALRQTWSRFHCPGQGSQ |
4U2X Chain:A ((1-216)) | ----DLEKGVVLSDLCNFLVSQTIQGWKVYWAGIEFDVT--------HKGMALLHRLKTNDFAPAWSMTRNLF-----------PHLFQN---PNSTIESPLWALRVILAAGIQDQL------------------------IDQSL---IEPLAGALGLISDWLLTTNTNHF-------------NMRTQRVKEQLSLKMLSLIRSNILKFINKLDALHVVNYNGLLSSIEIGTQ------------NHTIIITRTNMG--FLVELQEPDKSAMNRMKPGPAKFSLL---------------HESTLKAFT----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4U2X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -197351 for 1610 contacts (-122.6/contact) +
2D Compatibility (PS) -23102 + (NN) -6043 + (LL) 7304
1D Compatibility (HY) -7200 + (ID) 2200
Total energy: -228592.0 ( -141.98 by residue)
QMean score : 0.279
|
|
|