Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MFLYLCFIFQRTCSE----EMEE---ENATLLTEFVLTGFLHQPDCKIPLFLAFLVIYLIT--------IMGNLGLIVLIWKDPHLHIPMYLFLGSLAFVDASLSSTVT--PKMLINFLAKSKMISLSE--------------------CMVQFFSLVTTVTT-------ECFLLATMAYDRYVAICKA---------LLYPVIMT----NELCIQLLVLSFIGGLLHALIHE-----AFSFRLTFCN-SNIIQHFY----CDIIPLLKISCTDSSI----------NFLMVFIFAGSVQVFTIGTILISYTIILFTILEKKSIK-GIRKAVSTCGAHLLSVSLYY------------------------------GPLTFKYLGSASPQADDQDMMESLFYTVIVPLLN-----------PMIYSLRNKQ----VIASF------TKMFKSNV--- |
| 2Q06 Chain:A ((22-496)) | ATEIRASVGRMVGGIGRFYIQMCTELKLSDQEGRLIQNSITIERMVLSAFDERRNRYKDPKKTGGPIYRRRDGKWVRELILYDKEEIRRIWRQANNGEDATAGLTHMMIWHSNLNDATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAIKGVGTMVMELIRMIKRGINDRNFWRGENGRRTRIAYERMCNILKGKFQTAAQKAMMDQVRESRNPGNAEIEDLIFLARSALILRGSIAHKSCLPACVYGLAVASGYDFEREGYSLVGIDPFRLLQNSQVFSLIRPNENPAHKSQLVWMACHSAAFEDLRVSSFIRGTRVIPRGQLSTRGVQIASNENVEAMDSSTLELRSRYWAIRTRSGGNTNQQRASAGQISVQPTFSVQRNLPFERATIMAAFKGNTEGRTSDMRTEIIRMMESARPEDVSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAEEY |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q06.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -285924 for 2222 contacts (-128.7/contact) +
2D Compatibility (PS) -32288 + (NN) 42 + (LL) 0
1D Compatibility (HY) -10400 + (ID) 2800
Total energy: -331370.0 ( -149.13 by residue)
QMean score : 0.156
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