Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILQSEVMSKD------EGVKTEESNEFTG-----GIYFCSTEGSGLIDDDYSNIGEVSTEKNGALEEQLGDMSQELELEHVCKM------FP
2ZYZ Chain:A ((1-93))
MDVLQEQVFKDLKSRGFKIIEQLDDKIFIAEKKERYLFYVMVEGVEVTIQTLLSVINMGETLSMPVVLALVSNDGTVTYYYVRKIRLPRNIYA
General information:
TITO was launched using:
RESULT:
Template:
2ZYZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10119 for 476 contacts (21.3/contact) +
2D Compatibility (PS) -7621 + (NN) 3414 + (LL) 0
1D Compatibility (HY) -6000 + (ID) 500
Total energy: -588.0 ( -1.24 by residue)
QMean score : 0.275
(partial model without unconserved sides chains):
PDB file :
Tito_2ZYZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZYZ-query.scw
PDB file :
Tito_Scwrl_2ZYZ.pdb
: