Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MKPDIINPNFSVWVNASAGTGKTKILIDRVLRLLLENK-----RNIFCLTFTNAAANEMESRIHNILSKWAVCSDNELIASLEQLDLSLLLLQHHYPPSHPFLSSQCLTLRSRWPQTKNSEVFNHYLIQARRLFSELENLDLTIQTVHAFCYKLISSFPAEAGIVPNCTL---SECKELHSIVFDKLLHNEAVQDSIKFIAAEVD--ENKLRDLLYTLCIKRSVSANNLEYVKGKLSAPDEIHGLQSEATEQIERLAEILSKGSKRDRNYSKMLDLTSSSFIQVADTRIQKLDSSATRWNDISIENLVKVFLKSESCEKKSISSIITKSTLEKFPGAEQVIENIQNAVFTHVRDINSYQIFKRTSSFLDIFKVYIDLYNSEKSKNALLDYNDIIDLATNLLSNPDYKN--WVLFNLDQKIDHILVDEAQDNSISQWKIIANLCDEFFIRNDEKRTLFVVGDVKQSIYRFQGANPHLFNCMQQYFHTKSGGKDWISCQLEKSFRSTPETLTLVDRLFNNFREEISFVDSEIKHIPYRENDQGYVEIWPLLPRCKEEEQQALQIHLMHRKDYIITDRLLAQAIAHKIHNWLNEGRILVAKNRHIEPRDIMILVRQRNMLVDYVISELKKANIPVVGRDYFRIMDYIAVQDLIALTEFLLLPTNDLALANALKSPLFNFTEDDLFNIAYDRKEQSLWERLQNYSE-------------DIYSKLNDLINLSHIESPLTLFTHILRT-GKKKFAARL--GLECFEVLDEFMNLVLQFENPSLQAFVQWIKENNPEIKNDMQSERNAVRIMTIHKSKGLQAPIVFLVDTN---TVPKNSESIVLDA---MGAPFLCGKNNNAY----CDQVKREKKLEDYNEYLRLLYVALTRAEDELYILGKEPVQKGSWYDIITKYGEPYE----------KKYMELHQIFKEK---VEVLCVNANYPYIYKKRDYFNIPAVL-----PPPNLSILFQHSPSPSQYPLLSPQCFDTGIHSFSPLDSSVTHWDDKKRNTWMTDGYTRGLIIHSILQYMPKIEKDRRKNWIGKYLDNINIRKNKDEIYRKILAFNEKYDYLFDLDGKSEITLSGTINGKPVLVRL----------------------DKLCITQDKAIIIDYKSHR-----NVSVSSLNE-IKKQMLIYKTLVQEICPNKQVECMVIWVEDLTIQSDF |
| 3U4Q Chain:A ((10-1232)) | TWTDDQWNAIVSTGQDILVAAAAGSGKTAVLVERMIRKITAEENPIDVDRLLVVTFTNASAAEMKHRIAEALEKELVQRPG-----------------------------------------------SLHIRRQLSLLNRA-----SISTLHSFCLQVLKKYYYLIDLDPGFRIADQTEGELIGDEVLDELFEDEYAKGEKAFFELVDRYTTDRHDLDLQFLVKQVYEYSRSHPNPEAWLESFVHLYDVSEKSAIEELPFYQYVKEDIAMVLNGAKEKLLRALELTDNFLDDLAQIDELIQHQD--DFSELYKRVPAVSDPALLDEATDLRNGAKKLLEKLKTDY--FTRSPEQHLKSLA--EMKPVIETLVQLVISYGKRFEAAKQEKSIIDFSDLEHYCLAILTAENDREPSEAARFYQEQFHEVLVDEYQDTNLVQESILQLVTS----GPEETGNLFMVGDVKQSIYRFRLAEPLLFLSKYKRFTESGEGTG-RKIDLNKNFRSRADILDSTNFLFK------QLMGGKIGEVDYDEQAELKLG-----AAYPDNDETETELLLIDLETVQFEAKAIAKEIRKLISS---PFKVYKKTHRNIQYRDIVILLRSMP-WAPQIMEELRAQGIPVYANLTSGYFEAVEVAVALSVLKVIDNPYQDIPLASVLRSPIVGADENELSLIRLENKKAPYYEAMKDYLAAGDRSDELYQKLNTFYGHLQKWRAFSKNHSVSELIWEVYRDTKYMDYVGGMPGGKQRQANLRVLYDRARQYESTAFRGLFRFLRFIERMQERG--DQEDVVRLMTIHSSKGLEFPVVFVAGLGRNFNMMDLNKSYLLDKELGFGTKYIHPQLRISYPTLPLIAMKKKMRRELLSEELRVLYVALTRAKEKLFLIGSCKDHQKQLAKWQASASQTDWLLPEFDRYQARTYLDFIGPALARHRHADISGHPARFAVQMIHSYDSERLEAIRRGEPVFAFDEKAREQLSWTYPHQEVTQIRTKQSVSDEYSGRYRRPAFMMKKGLT----AAEKGTAMHTVMQHIP-LSHVPSIEEAEQTVHRLYEKELLTEEQKDAIDIEEIVQFFHTEIGGQLIGAKWKDREIPFSLALPAKEIYPDAHEADEPLLVQGIIDCLYETEDGLYLLAYKSDRIEGGFEGAAPILKKRYETQIQLYTKAVEQIA-KTKVKGCALYFFDGGHILTL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U4Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -332464 for 7663 contacts (-43.4/contact) +
2D Compatibility (PS) -109703 + (NN) -43090 + (LL) 6856
1D Compatibility (HY) -44400 + (ID) 9750
Total energy: -532551.0 ( -69.50 by residue)
QMean score : 0.345
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