Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MNKINDRDLTELSSYWVYQDINKDNDFTVNGKRFKQVDEYNDNGNKNKKGASDLKIYELLDEKGKPTGEQTMIYQGTSNEAINPNNPLKSLDIGDDWLQNAKLMDNSNKSTDYLKQSDEFADLYRDKLNDANKLSKYNFTQK-YGVSPNNYKNKTIVADGGNSEGGAGAKYQGAKH--------------PNEKVVATDPAMVPYAA-----------WQKFARPRFDNMISFNSTNDLLTWLQDPFIKDMPGKRVNISDGVPRLDALIDSHVGYKRKLNRKDNTYDTVPLIKIKSV----KDTEIKNGKKVKKTINI----TLDMDGRIPINVWTGD-SIARSGRGTLIKLNLENLDALSKLITGETSGMLAECV---IFLNESFNISENENKNFADRKQQLSEGFKDKINLFQLEEMERTLISKINSLEEVADETIESISAVK-HLLPDFALDALKERINELFKGIKSFIEKV----------YDSIDNEILEIFKNIDHDFRDGVSEEMMKHLKVVKQNIERIKNQ-NDIYGRQIAEIRSIMKQQDATILDGNFQINCSGENMVQGLVIPSNYLGRKMKILKDHIDDGIKKIA-DYVQSIYDEYASKIVDVIKYLINTI-PKIRKNLRHAIEMLNVKKKEFLSLI-PN-----------VTCNYIKTKLEELDNTLG---KWEPFLNDLKAVSPILDNHLDDIVKNMKPLIVQMLFEPSHYD----DMFI-------LNTQAHARLDQMAQQFEVVCNGLNENEGQAIQTMDQSASLIRSNLIQVKEQLEKLAVY-------- |
| 1B7T Chain:A ((5-835)) | FSDPDFQYLAVD-------AFDGKKNCWVP-DEKE--GFASAEIQSSKGDEITVKIVADSSTRTVKKDDIQSMNPPKFEKLEDMANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRENQSCLITG---ESGAG-KTENTKKVIMYLAKVACAEGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNY-HIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDNIDDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFK-----QAESDGTAEAEKVAFLCGINAGDLLKALLKPK-------VTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEK--PMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSI---TGWLEKNKDPINENVVALLGASKEPLVAELFKA-------------QTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQ------CNGRKGFPSRLIYSEFKQRYSILAPNAIPDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQWWKLYSKVKP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B7T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 83156 for 4883 contacts (17.0/contact) +
2D Compatibility (PS) -68609 + (NN) -7214 + (LL) 3184
1D Compatibility (HY) -15600 + (ID) 4250
Total energy: -9333.0 ( -1.91 by residue)
QMean score : ?
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