Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQDFSSLLLKLQEYWKDQGCLVIQPY----------DIPAGAGTFHPATLLRSLDKKPWNVAYV--------------APSRRPTDGRYGENPNRLGSYYQFQVVIKPSPSNIQELYLKSLEVLGINLNEHDIRFVEDN----WESPTLGAWGLGWEVWLDGMEVTQFTYFQQVGGIPCSPI-PVEITYGLERLTMYVQKVENILEIEWAKKD----NESVRYAQVHLESEYEFSKYHFEVASVERLLEMFKNAQ--AEALHCLENKLPLPAYDLVMLCSHFFNILDARKAISVAERQNYILQIRDLAKGCAVLYKEQE-EEREERLKNALTKA----------------------------------------------------- |
| 1LI5 Chain:A ((1-402)) | MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVAMVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNY-SEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LI5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61601 for 2136 contacts (-28.8/contact) +
2D Compatibility (PS) -30863 + (NN) -154 + (LL) 100
1D Compatibility (HY) -4800 + (ID) 2000
Total energy: -99318.0 ( -46.50 by residue)
QMean score : 0.197
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