Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTINQLIRKERKKVVKKTKSPALVECPQRRGVCTRVYTTTPKKPNSALRKVAKVRLTSKFEVISYIPGEGHNLQEHSIVLVRGGRVKDLPGVKYHIVRGALDTAGVNKRTVSRSKYGTKKAKATDKKATDNKKK
1N34 Chain:L ((5-122))
-PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPKEA----------
General information:
TITO was launched using:
RESULT:
Template:
1N34.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30144 for 797 contacts (-37.8/contact) +
2D Compatibility (PS) -12650 + (NN) -2396 + (LL) 936
1D Compatibility (HY) -9600 + (ID) 4550
Total energy: -58404.0 ( -73.28 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_1N34.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N34-query.scw
PDB file :
Tito_Scwrl_1N34.pdb
: