Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNILLVCNAGMSTSFLVEKMKAAGTEQGVEANIWAVSDAELHENWEKADVILLGPQVGYLKGNTEKVVGGKIPVEVINMLDYGRVNGAAVLERAIELIG
1ILO Chain:A ((1-77))
MMKIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIKEMDQILEAG-------------LTALPGLAVDGELKIM-------GRVASKEEIKKILS---
General information:
TITO was launched using:
RESULT:
Template:
1ILO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30078 for 570 contacts (-52.8/contact) +
2D Compatibility (PS) -8793 + (NN) -5657 + (LL) 1724
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -45854.0 ( -80.45 by residue)
QMean score : 0.427
(partial model without unconserved sides chains):
PDB file :
Tito_1ILO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ILO-query.scw
PDB file :
Tito_Scwrl_1ILO.pdb
: