Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGKLLRKPLNERIAPGVTLVQDINQGNSPLSYVGFRLIELEEDAVYQETLDGLECCIVALTGKISVSE---GDHVFSEIGTRANVFEKIPTDSVFISGGRAFQ--VKADAEKARVALCYSPADRNLPTTLIKASDNSIEQR-GKYQNKRLVHNILPDVSE--VASSLLVVEVYTDGGNFSSYPPHKHDHDNLPAESLLEESYYHEI-NPKQGFIFQRVYTDDRALDETMAVEHQNAVIVPEGYHPVGVPDGYDSYYLNVMA--GPKRVWEFHN------DPDHEWILERD---- |
| 2Y8V Chain:A ((8-287)) | -------PEHRRV---ICYHQTLCPNRGDY----VSVLPLVKNNTGVTHIIIAAFHLNEDPGHITLNDDPPDHEMYNPLWAEVPVLKRSGVKVMGMLGGAAQGSYRCLDGDQEKFERYYQPLLAMVRRHQLDGLDLDVEEEMSLPGIIRLIDRLKLDLGDDFIITLAPVAAALLGIGNLSGFDYRQLEQQRGSKISWYNAQFYNGWGLAEDPRMYAAIVAQGWSPQRVVYGLLTNPGNGSQGYVPRERIGPVLAVLVEQFPNFGGVMGWEYFNSIPGEQQSPWQWAAEMSLSMH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y8V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21738 for 1996 contacts (-10.9/contact) +
2D Compatibility (PS) -26885 + (NN) -385 + (LL) 532
1D Compatibility (HY) -8800 + (ID) 1700
Total energy: -58976.0 ( -29.55 by residue)
QMean score : 0.088
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