Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEEKGILLQSGTNELEIVTFTVGENLFCINVLKVKEIIHPLEVTPVPDSNPAIEGVSQVRGEIMPVVNLARVMKLPEIEPENTKFIITELNQMKIVFRVDEVHRIQRISWEQIEEPEKLSIGLEELAVGIVKLDGNLVLLLDYEKIIYEISGNADFAVTGEDRIARKVNREEKTIFIAEDSQMLRQLLEDTLHEAGYTNLQFFANGREAQEHIFKLLKEQKEQTFENVNLLITDIEMPQMDGHHLTKVIKEDEIGRELPVVIFSSLITEDLEHKGAGVGADAQVSKPNIHQLINILDELVL
1K0S Chain:A ((1-151))
-----MKTLADALKEFEVLSFEIDEQALAFDVDNIEMVIEKSDITPVPKSRHFVEGVINLRGRIIPVVNLAKILGISFDEQKMKSIIVARTKDVEVGFLVDRVLGVLRITENQLDLTNVSDKFGKKSK-GLVKTDGRLIIYLDIDKIIEEITVKEGV-------------------------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1K0S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124093 for 1154 contacts (-107.5/contact) +
2D Compatibility (PS) -16375 + (NN) -4355 + (LL) 12556
1D Compatibility (HY) -12800 + (ID) 2300
Total energy: -147367.0 ( -127.70 by residue)
QMean score : 0.468
(partial model without unconserved sides chains):
PDB file :
Tito_1K0S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K0S-query.scw
PDB file :
Tito_Scwrl_1K0S.pdb
: