Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKHIRVAAIIRHQNKILLHTTKNENYWTLPGGAVE-NELTKEGLQREMREELGEEVTIRELKIIAENRFVYRGEEMDSIEFYYIVELYPNSALLELSTFTKIEQFGQNGETDYELNFKWFEIDKVSEIEILPKFLQTELTQLSSDRIKHIQ
3I7U Chain:A ((2-127))
KKEFSAGGVLFKDGEVLLIKTP-SNVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDYIGEIHYWYTLKGERIFKTVKYYLMKYKE---G----EPRP---------SWEVKDAKFFPIKEAKKLLKYK-GDKEIFEKALK-------
General information:
TITO was launched using:
RESULT:
Template:
3I7U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60422 for 973 contacts (-62.1/contact) +
2D Compatibility (PS) -13362 + (NN) 2168 + (LL) 1468
1D Compatibility (HY) -2000 + (ID) 1200
Total energy: -73348.0 ( -75.38 by residue)
QMean score : 0.353
(partial model without unconserved sides chains):
PDB file :
Tito_3I7U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3I7U-query.scw
PDB file :
Tito_Scwrl_3I7U.pdb
: