Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEIKFLHMADLHLDSPFIGLSTLPQPLFSAIQESTFQSLERITTVAIKEAVDFVLIAGDIYDSEDQSVRAQARFAKEMKRLEVANIPVFMIHGNHDFIEKHK---EKLALPSNVHVFSEQVEVMLHKTATGV--------------SVNIYGFSYNERHIRSSRIDEYKVQ-GDADFHIALLHGSEVSSSEEHDVYAPFRVQEISKKGFDYWALGHIHKRQLLAES-PSIYYPGNIQGRNRKESGEKGASIINLSEASTTIDFIGTSPIIWEEIIIPLPKNSEINAFYREITNVLESYQGRSHSYFLHIIIQMASSQKINTNDWLQMLQEEVELSNTTFVWVHKLTTEITNRSNLQTWYESHLAGEEIRRSFEQLQDESAFYQSVEALYLESGANRYLDDLSEQERERLLENALMELGMTLAEVEGDEK |
1II7 Chain:A ((1-333)) | ---MKFAHLADIHLGYEQFHK--------PQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFAIEGNHDRTQRGPSVLNLLEDFGLVYVIGMRKEKVENEYLTSERLGNGEYLVKGVYKDLEIHGMKYMSSAWFEANKEILKRLFRPTDNAILMLHQGVREVSEARGEDYFEIGLGDLPEGYLYYALGHIHKRYETSYSGSPVVYPGSLERWD-------------FGDYEVRYEWDGIK------------------------------------------------------------FKERYGVNKGFYIVEDFKPRFVEIKVRPFIDVKIKGSEEEIRKAIKRLIPLIP-KNAYVRLNIGWRKPFDLTEIKEL------------LNVEYLKIDTWRI |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1II7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -94103 for 2529 contacts (-37.2/contact) +
2D Compatibility (PS) -34001 + (NN) -7363 + (LL) 7760
1D Compatibility (HY) -11200 + (ID) 3450
Total energy: -142357.0 ( -56.29 by residue)
QMean score : 0.386
|
|
|