Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKIYDTMTRSLQDFIPLNEGKVNMYVCGPTVYNYIHIGNARS-VVAFDTIRRYFEYCGYQVNYISNFTDVDDKIIKGAAEAGMDTKSFSDKFISAFMEDVAALGVKPATKNPRVI--DYMDEIIDFVKVLVDKEFAYEANGDVYFRVSKS------------HHYA------KL---ANKTLE--DLE------IGASGRV------------DGE-----GEIK--ENPL----DFALWKSAKS--GEVSWESPWGKGRPGWHIE------------CSVMA----------------TEILGD----TIDIHGGGADLEFPHHTNEIAQSEAKT---------GKTFANYWMHNGFVNVDNEKMSKSLGNFITVHDMLKSVDGQVIRFFLATQQY-RKPVNFTEKAVHDAEV--NLKYLKNTFNLPIQENA-------------------NDEELEQFVKAFQEAMDDDFNTANGITVIFEMAKWINSGHYTSKVKETLAELLEIFGIVFQEEVLDADIESLIEQRQEARANRDFATADRIRDELAKQGIKLLDTKDGVRWTRD |
| 1RQG Chain:A ((2-471)) | --------------------VRYMVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPISFRALKEGRSPREIVDEFHEQIKITFQRAKISFD-FFGRTELPIHYKLSQEFFLKAYENGHLVKKVTKQAYCEHDKMFLPDRFVIGTCPYCGAEDQKGDQCEVCGRPLTPEILINPRCAICG--RPISFRDSAHYYIKMQDFAERLKRWIEKQPWKPNVKNMVLSWIEEGLEERAITRDLNWGIPVPLDEEDMKGKVLYVWFEAPIGYISITIEHFKRIGKPNEWKKYWLNIDGQTRVIHFIGKDNIPFHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLTLEGKKFSTSRNWAIWVHEFLDVFPADYLRYYLTTIMPETRDSDFSFSDFKVRINEELVNNLGNFVHRALTFVNRYFDGVVPERGELDELDREALEEIEKAFKEVGELI-MNYRFKDALKRVMSLASFGNRYFDHKQPWKTAKEDKVRTGTTVNISLQIVKALGILLEPFLPDASEKIWHLLNLDEVKRWEFRELPAGHKVRKPEIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RQG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114216 for 2465 contacts (-46.3/contact) +
2D Compatibility (PS) -37291 + (NN) -7735 + (LL) 1788
1D Compatibility (HY) -6800 + (ID) 2700
Total energy: -166954.0 ( -67.73 by residue)
QMean score : 0.366
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