Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MRIEALMEKERRVQYRLLSFLRGSPQAIALKLALLETGLSRATLLKYINN-----LNSYFEQEKVNCRIVYYKDKLFLEEDYNLSNQEVLKALMKDSIKYTILISLFNQRQFTIVGLSQELMVSEATLNRHLAHLNELLAEFDIAISQGKQIGDELQWRYFYYELFKQLWSYDKCQNMIKKLDLDSLILLIERLAQHTLTREAQQNLGLWFSICHHRLLAMEKISDNLKPIVEHYQCNAFYKRLDAALVLYMSRFALEYREGEVLATFAFLHSQNILPINTMEYIMGFGGPIIDCVTETIIYFKKESILADETSDQVIYQLGQLYSHYYFFK----GHILVEQPDLEQTYRLIDHNMRDKLHHISKKIIANVNRIRPLTEDGCSLLTLHLLELLIFSKNSQKMPFRIGLDMTGNAVEQSLLEYRIRQHFSGNNSIQVEPYDEGKGFDMVIYQSRSRPYKAKLTYCLNKGASERELQEID-SLIYDN----- |
| 4OJV Chain:A ((1-369)) | MVVFEITILGANGGPTEYGTQCFILKPARTEDPELIAVDGGAGMYQLREMLVQGDDELVPSFYEHDREP-IEFFIDSKLNIQKGLS----KSLLQSLKRQGEHFESANTMKKTYEVFQGITDYYIT-----HPHLDHISGLVVNSPSIYEQENS-------------KKKTIWGLPHTIDVLQKHVFNDLIW-------PDLTAERSRKLKLKC---------------------------------------------LNPKEVQKCTIF----PWDVIPFKVHHGIGVKTGA-------------------------------PVYSTFYIFRDRKSKDCIIVCGDVEQDRRESEESLLEEFWSYVAENIPLVHLKGILVECSCPL-----------SSKPEQLYGHLSPIYLINELSNLNTLYNSSKGLSGLNVIVTHVKSTPAKRD----------PRLTILEELRFLAEERNLGDLRISIALEGHTLFL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OJV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82578 for 2875 contacts (-28.7/contact) +
2D Compatibility (PS) -35192 + (NN) 6159 + (LL) 12860
1D Compatibility (HY) -12000 + (ID) 3150
Total energy: -113901.0 ( -39.62 by residue)
QMean score : 0.119
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