Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEWIKENMIYVIAIGLLLIFSGVAVYRSVTQNKSQSPQVEHMKPLDSSSSSMDESETTDEKNYRTAKLKLEHPYSESSEEQKQEVRKAFDEAIKAIQQANHLTEVKGTLDNHLSMSQDGMIQTLAMAILVNQYSYQSSKLEVTPSENEDVVQFLIVLTKQGEDSCYFVGNFNTTVSQIQLKAYVGGNIGGTFG |
2KK7 Chain:A ((1-52)) | ------------------------------------------------MAVKLMGVDKIKSKILDDAKAEANKIISEAEAEKAKILEKAKEEAEKRKAEI---------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13463 for 224 contacts (60.1/contact) +
2D Compatibility (PS) -5523 + (NN) -1334 + (LL) 9996
1D Compatibility (HY) 400 + (ID) 550
Total energy: 16452.0 ( 73.45 by residue)
QMean score : 0.394
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