Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTISNQELTLTPLRGKSGKAYIGTYPNGERVFVKYNTTP-----------ILPALAKE-Q-IAPQLLWARRTSNGDMMSAQEWLDGRTLTKED--------MG--SKQIIHILLRLHKSRPLVNQLLQLGYKIENPYDLLMDWEKQTPIQI---RE---NTYLQSIV-TELKRSLPEFRTEVATIVHGDIKHSNWVITTS----GLIYLVDWDSVRLTDRMYDVAYILSHYIPQKHWKDWLSYYGYKDNE-KVWSKIIWYGQFSYLSQIIKCFDKRDMEHVNQEIYELRKFRELIKKHNAS |
| 3TDW Chain:A ((27-295)) | -----------LGEGFRNYAILV----NGDWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILGEDGMAVLPDDAKDRLALQLAEFMNELSAFPVETAIS--AGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPV--YTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDPDYDYVYLLEDC-GE-LFTRQVMAYRGEVDLDTHIRKVSLFVTFDQVSYLLEGLRARDQDWISEGLELLEEDKANNFGANS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TDW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78611 for 1671 contacts (-47.0/contact) +
2D Compatibility (PS) -24136 + (NN) -5315 + (LL) 1620
1D Compatibility (HY) -12800 + (ID) 1750
Total energy: -120992.0 ( -72.41 by residue)
QMean score : 0.429
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