Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKLIAIDMDGTLLNDEK-KIPKENIQAIKEATQAGIKIVLCTGRPMSGILPYFNELGLTKEEYIIMNNGCSTYSTKDWQLIDSATLTHDELIFLEEVVKEF-PNVCLTLTAENTFYAVGEEVPEIVAYDADLV-FTKAKSTSLDALRNQEEIVFQAMYMGLDADVTAFQEAV-EEALISKFSGVRSQDYIYEIMPQGVTKARGLKSLIAKLGLDINQVMAIGDAPNDIELLDLVPNSVAMGNASDEIKSRCKYITVDNNKAGVAKAIYDYALR |
3DAO Chain:A ((20-283)) | MIKLIATDIDGTLVKDGSLLIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKH--KLLYITDGGTVVRTP--KEILKTYPMDEDIWKGMCRMVRDELPACDYFAATPDFCFAEDGGSP-IFHLLRDSYGFEMREVDDITRL-DRND-IIKFTVFHPDK-CEELCTPVFIPAWNKKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAAKHTCAPYWENGVLSVLKSFL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DAO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176464 for 2137 contacts (-82.6/contact) +
2D Compatibility (PS) -27801 + (NN) -7430 + (LL) 712
1D Compatibility (HY) -16000 + (ID) 3050
Total energy: -230033.0 ( -107.64 by residue)
QMean score : 0.521
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