Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------MKKKLGCLGVLMSIPFFIVVIVTIIFSSSQGDCQVTPDLSTQFVTSSDSASQTDWTKKGSI-----------ANVT-AGKVFHAWVSKGLSGASAA--GIVGWVNSE-GGFGKYSWN------YRYVTTAELKNEG------YTFYNPAKLGYQIMKSVG-TVGK |
| 1IQ4 Chain:A ((1-179)) | MNRLKEKYLNEVVPALMSKFN-YKSIMQVPKIEKIVINMGVGDAVQNPKALDSAVEELTLIAGQRPVVTRAKKSIAGFRLRQGMPIGAKVTLRGERMYEFLDKLISVSLPRARDFRGVSKKSFDGRGNYTLGIKEQLIFPEIDYDKVNKVRGMDIVIVTTANTDEEARELLALLGMPFQK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IQ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42153 for 821 contacts (-51.3/contact) +
2D Compatibility (PS) -14336 + (NN) -192 + (LL) 56
1D Compatibility (HY) -4000 + (ID) 950
Total energy: -61575.0 ( -75.00 by residue)
QMean score : 0.170
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