Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLQENKTAIFDNVSKLALKAGRAPESVHIVAVTKYVN--CQTTEALIRTGVNHIGENRVDKFLEKYQALKDEKLTWHLI--GSLQRRKVKDVINYVDYFHALDSVKLAAEIQKRAQKPVKCFLQVNISREDSKHGFT-IEQIDDALNLISRYDKIELIGIMTMAPLKATKEEISSIFEETESLRKRLQARNIERMPFTELSMGMSRDYDIAIQNGSTFVRIGTSFFK------------------ |
| 1BD0 Chain:A ((12-244)) | ----VDLDAIYDNVENLRRLLPDDTHIMAVVKANAYGHGDVQVARTALEAGASRLAVAF----LDEALALREKGIEAPILVLGASRPADAALAAQQ-RIALTVFRSDWLEEASALYSGPFPIHFHLKMDTGMGRLGVKDEEETKRIVALIERHPHFVLEGLYTHFA-TADEVNTDYFSYQYTRFLHMLEWLPSRPPLVHCANSAASLRFP---DRTFNMVRFGIAMYGLAPSPGIKPLLPYPLKEA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BD0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70570 for 1703 contacts (-41.4/contact) +
2D Compatibility (PS) -22437 + (NN) -6571 + (LL) 1656
1D Compatibility (HY) -5600 + (ID) 1500
Total energy: -105022.0 ( -61.67 by residue)
QMean score : 0.442
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