Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MYREITAVEHDRFVSESNQTNLLQSSNWPKVKDNWGSQLLGFFDGE-TQIASASILIKSLPLGFSMLYIPRGPIMDYSNLDIVTKVLKDLKAFGKKQRALFIKCDPLIYLKMVNAKDFENSPDEKEGLIAIDHLQRAGADWTGRTTDLAHTIQPRFQANLYANQFG-----LDKMSKKTRQAIRTSKNKGVDIQFG-SHELLEDFAELMKKTEDRKGINLRGIDYYQKLLDTYPNNSYITMASLDVAKRLEKIEKECQIAQSERIKSLELNREKKVKQHQGTIDRLNKEIDFLKEAQKAYDRDIIPLAATLTLEFGNTSENIYAGMDDYFKSYSAPIYTWFETAQRAFERGNIWQNMGGIEN-DLSGGLYHFKSKF-EPIIEEFIGEFNIPVNRLLYKASNYVYALRKKRNS |
| 1P4N Chain:A ((1-335)) | PVLNLNDPQAVERYEEFMRQSPYGQVTQDLGWAKVKNNWEPVDVYLEDDQGAIIAAMSMLLGDTPTDKKFAYASKGPVMDVTDVDLLDRLVDEAVKALDG-RAYVLRFDPEVAYSDEFNTTLQD-------------HGYVTRNRNVADAGMHATIQPRLNMVLDLTKFPDAKTTLDLYPSKTKSKIKRPFRDGVEVHSGNSATELDEFFKTYTTMAERHGITHRPIEYFQRMQAAFDADTMRIFVAER---------------------------------------------------------EGKLLSTGIALKYGRKIWYMYAGSMDGNTYY-APYAVQSEMIQWALDTNTDLYDLGGIESESTDDSLYVFKHVFVKDAPREYIGEIDKVLDPEVYAELVKD--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P4N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80955 for 2572 contacts (-31.5/contact) +
2D Compatibility (PS) -34010 + (NN) -8385 + (LL) 6468
1D Compatibility (HY) -12000 + (ID) 3850
Total energy: -132732.0 ( -51.61 by residue)
QMean score : 0.443
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