Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MITSIVFDVDDTIYDQQAPYRIAVEKCFPDFDMSAINQAYIRFRHYSDIGFPRVMAGEWTTEYFRFWRCKETLLEFGYREIDEATGIYFQEIYEHELENITMLDEMRMTLDFLKSKNVPMGIITNGPTEHQLKKVKKLGLYDYVDPKRVIVSQATGFQKPEKEIFNLAAEQFDMNPSTTLYVGDSYDNDIMGAFNGGWHSMWFNHRGRSLKPGIKPVYDVAIDNFEQLFGAVKVLFDLPDNKFIFDINDKSNPVLEMGLNNGLMMAAERLLESNMSVDKVVILLRLTAKQEKVLRMKYAR |
2GO7 Chain:A ((4-205)) | -KTAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFI--F--KYSV-------QDLL-----VRVAEDRNLDV--EVLNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFT--EILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRT-LDVEFAQNSGIQSINFLESTY--------EGNHRIQALADISRIFETK----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GO7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99634 for 1635 contacts (-60.9/contact) +
2D Compatibility (PS) -22153 + (NN) -11191 + (LL) 7172
1D Compatibility (HY) -8800 + (ID) 1750
Total energy: -136356.0 ( -83.40 by residue)
QMean score : 0.391
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