Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------------MRLDKLLGQAGFG-SRNQVKKLIRSRQVSVDGQIVTKDNVIVDSGLQSIFVGKE----------RVCLKESSYYLLYKPSG-VVSAVRDSEHKTVIDLISEK----DRVEGLYPIGRLDRDTEGLLIITNNGPLGYRMLHPK--HHVAKTYYVEV------NGFLERDAITFFEEGVVFDDGTKCKPAELTIDTAN--NDKSTARITITEGKFHQVKKMFLAYG------------------------VKVIYLRRISFGDLRLDMNL-KPGQYRRLRDSEAAILKRYLD--------------- |
2IST Chain:A ((1-324)) | AQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQRVLVNGKVCDKPKEKVLGGEQVAINAEIERFEPQDIPLDIVYEDEDIIIINKPRDLVVHPGAGNPDGTVLNALLHYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMTAGGTVDEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHMAHITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDRQALHATMLRLYHPISGIEMEWHAPIPQDMVELIEVMRADFEEHKDEVDW |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IST.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73659 for 1691 contacts (-43.6/contact) +
2D Compatibility (PS) -25177 + (NN) -2717 + (LL) 0
1D Compatibility (HY) -5600 + (ID) 2150
Total energy: -109303.0 ( -64.64 by residue)
QMean score : 0.382
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