Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLIGIVGTNSNKSTNRQLLQYMQQHFADKAEIELIEVKDLPLFNKPADKNVPQVILDIAAKIEEADGVIIGTPEYDHSIPSALMSVLAWLSYGI--YPLLNKPVMITGASYGTLGSSRAQLQLRQILNAPELKASVLPDEFL-LSHSLQAFDKDGNLHDIETSQKLDAIFDDFRLFVKITGKLSNARDLLQKEAENFDWESL
3U7R Chain:A ((3-183))
KTVAVMVGSLRKDSLNHKLMKVLQKLAEGRLEFHLLHIGDLPHYNDDLWADAPESVLRLKDRIEHSDAVLAITPEYNRSYPGMIKNAIDWATRPYGQNSWKGKPAAVIGTSPGVIGAALAQARLKNDLL--HVGTVMMSMPEAYIQWHAEAYAADGSVTDEKTAKFLQGFVDAFVDWIEKHGL--------------------
General information:
TITO was launched using:
RESULT:
Template:
3U7R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121499 for 1416 contacts (-85.8/contact) +
2D Compatibility (PS) -19524 + (NN) -10475 + (LL) 1512
1D Compatibility (HY) -7200 + (ID) 2200
Total energy: -159386.0 ( -112.56 by residue)
QMean score : 0.625
(partial model without unconserved sides chains):
PDB file :
Tito_3U7R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3U7R-query.scw
PDB file :
Tito_Scwrl_3U7R.pdb
: