Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIIVPATSANIGP-----GFDSIGVALSKYLSIEVLE-ESTEWLVEH-N--------LVNI----P--KDHTNLLIQTALHVKSD-----LAPHRLKMFSDIPLARGLGSSSSVIVAGIELANQLGNLALSQKEKLEIATRLEG-------HPDNVAPAIFGDLVISSIVKNDIKSLEV-MF-PDSSFIAFIPNYE-LKTSDSRNVLPQKLSYEDAVASSSVANVMVASLLKGDLVTAGWAIERDLFHERYRQP--LVKEFGVIKQISTQNGAYATYLSGAG--PTVMVLCSKEKEQPIVTELSKLCLDGQIQVLNIERKGVRVEKR |
| 1KKH Chain:A ((6-315)) | MIIETPSKVILFGEHAVVYGYRAISMAIDLTSTIEIKETQEDEIILNLNDLNKSLGLNLNEIKNINPNNFGDFKYCLCAIKNTLDYLNIEPKTGFKINISSKIPISCGLGSSASITIGTIKAVSGFYNKELKDDEIAKLGYMVEKEIQGKASITD-TSTITYKGILEIKNNKFRKIKGEFEEFLKNCKFLIVYAEKRKKKTAELVNEVAKIENKDEIFKEID--KVIDEALKIKNKEDFGKLM-TKN-HELLKKLNISTPKLDRIVDIGNRFG-FGAKLTGAGGGGCVIILVNEEKEKELLKELNKE--DVRIFNCRMMN-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KKH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105428 for 2269 contacts (-46.5/contact) +
2D Compatibility (PS) -28718 + (NN) -1753 + (LL) 1552
1D Compatibility (HY) -8800 + (ID) 2900
Total energy: -146047.0 ( -64.37 by residue)
QMean score : 0.355
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