Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLAEYSEAEFQKALRRNIRALTRGKTISSTPKAVLLGGQSGAGKTTIHRIKQKEFQGNIIIIDGDSFRSQHPNYL-ALQEEYGKYSVDYTKDFAGKMVEHLIGGLSKQ---SYHLLIEGTLRTTEVPRKTAQLLKSRGYQ-VSLALIATKPELSYLSTLIRYEELYAIDPNQARATPKEYHDGIVEHLVDNLRELENDKLFNRIQIYQRDRHCVYDSETDKGIAAEVLQECLFGKWSKVEEEMLRVGQERLRELSMRTPK |
| 1AK2 Chain:A ((14-145)) | -----------------------------PKGVRAVLLGPPGAGKGTQAPKLAKNF--CVCHLATGDMLRAMVASGSELGKKL-KATMDAGKLVSDEMVLELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLLIRRITGRLIHPQSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNKKALKIRLEAYHTQTTPLVEYYSKRGIHSAIDASQTPDVVFASILAAFSKATS--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AK2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32238 for 826 contacts (-39.0/contact) +
2D Compatibility (PS) -13043 + (NN) 161 + (LL) 3072
1D Compatibility (HY) -2800 + (ID) 1300
Total energy: -46148.0 ( -55.87 by residue)
QMean score : 0.286
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