Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEIYLGKNTKRN------QRLLTFLDSYEIAYTCKESGDINREVLQSLFSKTSDCFDLLSPSFLRFKRQNQMTLSELMNLVLRNPDQNIRLPLVIDKDKVYPDMGVEEARVFIPRRLKVTFFRDSLFCDKEQR
1U6T Chain:A ((1-39))
VIRVYIASSSGSTAIKKKQQDVLGFLEANKIGFEEKDIAANEENRKWMRENVPENSRPATGYPLPPQIFNESQYRGDYDAFFEARENNAVYAFLGLTAPPGSKEAEVQAKQQALEHHHHHH-------------
General information:
TITO was launched using:
RESULT:
Template:
1U6T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18392 for 141 contacts (-130.4/contact) +
2D Compatibility (PS) -3467 + (NN) -2968 + (LL) 1056
1D Compatibility (HY) -3600 + (ID) 350
Total energy: -27721.0 ( -196.60 by residue)
QMean score : 0.739
(partial model without unconserved sides chains):
PDB file :
Tito_1U6T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U6T-query.scw
PDB file :
Tito_Scwrl_1U6T.pdb
: