Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKKIILGILSLLSVVTLVACGSSDKQLQDKVEKKGKLVLAVSPDYAPFEFKALVNGKDKVVGADIELAQAIADELHVKLEVSPMSFDNVLSSLQTGKADMAISGLSYTKERAKVYDFSKPYYTTENAVLVRKSDLGKYTSIESLKGKKIAVQKGSIEEGVSKKSFK-NSHVVSLTAMGEAISELKSGKVEAVDLEKPVAEGYLAQNPD--LVLAKFALKTGEGDAKAVALPKDSGKMLKTVNKVIKRLEKEDKYKVYISDAAKLTGNQVE
2PVU Chain:A ((38-265))-------------------------------GATKKKVVVGTDAAFAPFEYMQ----KGKIVGFDVDLLDAVMKAAGLDYELKNIGWDPLFASLQSKEVDMGISGITITDERKQSYDFSDPYFEATQVILVKQGS--PVKNALDLKGKTIGVQNATTGQEAAEKLFGKGPHIKKFETTVVAIMELLNGGVDAVITDNAVANEYVKNNPNKKLQVIEDPKNF-ASEYYGMIFPK-NSELKAKVDEALKNVINSGKYTEIYKKWFGKEPKLDR


General information:
TITO was launched using:
RESULT:

Template: 2PVU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68575 for 1854 contacts (-37.0/contact) +
2D Compatibility (PS) -24424 + (NN) -6598 + (LL) 2436
1D Compatibility (HY) -15200 + (ID) 3250
Total energy: -115611.0 ( -62.36 by residue)
QMean score : 0.513

(partial model without unconserved sides chains):
PDB file : Tito_2PVU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PVU-query.scw
PDB file : Tito_Scwrl_2PVU.pdb: