Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------MKKRASGVLMHITSLPGDLGIGTF-------------GREAYAFVDFLVETDQKFWQIL----PLTTTSFGDSPYQSFSAVAGNTHLIDFDL----LTLEGFISKDDYQNISFGQDPEVVDYAGLFEKRRP------VLEKAVKNFLQEERATR---MLSDFLQE------EKWVTDFAEFMAIKEHFGNKALQE------------------WDDKAIIRREEEALA-------------GYRQKLSEVIKYHEVTQYFFYKQWF-ELKEYANDKGIQIIGDMPI-YVSADSVEVWTMPELFKLDRDKQPLAIAGVPADDFSDDGQLW-------GNPIYNWDYHKESDFDWWIY---RIQSGVKMYDYLRIDHFKGFSDYWE------IRGDYQTANDGSWQPAPGPELFATIKEKLGDLPIIAENLGYIDERAERLLAGTGFPGMKIMEFGFYDTTGNSIDIPHNYTENTIAYAGTHDNEVINGWFENLTVEQKAYAENYMRRLPNEPITETVLRTLYATVSQTTI----------------------------TCMQDLLDKPADSRMNMPNTVGGNWQWRMRKEDLTENRKAFL-KEITTIYNRGNK----------------------------------- |
| 4AEE Chain:A ((1-696)) | MYKIIGREIYGKGRKGRYIVKFTRHWPQYAKNIYLIGEFTSLYPGFVKLRKIEEQGIVYLKLWPGEYGYGFQIDNDFENVLDPDNEEKKCVHTSFFPEYKKCLSKLVIKEPDNPLDKIIHIEESGFIHKFNGEIIIRLIAPTEINEPLIDLGNEIREPLTKHVVGDNIVYQYIIPSRSILRYRFIFNYNDKKLFYGDEGVSENSSYIVVNSKYIPGVDKPRWYMGTVYYQIFIDSFDNGDPNNDPPNRIKKTVPREYGYYGGDLAGIMKHIDHLEDLGVETIYLTPIFSSTSYHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDITMHHTNPCNELFVKALREGENSPYWEMFSFLSPPPKEIVELMLKYIDGEECRSRELYKLDYFRNNKPFYEAFFNIWLMAKFNHDNPRTVDYFIDITKFWIDKGIDGFRIDVAMGIH----YSWMKQYYEYIKNTYPDFLVLGELAENPRIYMDYFDSAMNYYLRKAILELLIYKRIDLNEFISRINNVYAYIP-HYKALSLYNMLGSHDVPR------IKSMVQNNKLLKLMYVLIFALPGSPVIYYGDEIGLEGGRDPDNRRPMIWDRGNWDLELYEHIKKLIRIYKSCRSMRHGYFLVENLGSNLLFIKRWINNEEIIFLLNVSSKDISVDLKYSFDIYNEKNVLLRGYGFLILGSKPCNI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AEE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32836 for 3618 contacts (-9.1/contact) +
2D Compatibility (PS) -49684 + (NN) 13896 + (LL) 372
1D Compatibility (HY) -16400 + (ID) 2600
Total energy: -87252.0 ( -24.12 by residue)
QMean score : 0.180
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