Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALFFTFLKVSQVIFLVLLIAYASFLVISLVIGGVHLYEKNERKKSLTRNKEKIPISIIVPAYNESTTIVSSIDSLLHLDYE-AYEIIVVDDGSSDNTSDVLKEEFALMKISNTIDSIIATQTCKDVFQRQVGKVKLTLIVKENGGKGDALNMGINAANYDYFLCLDADSML-QVDSLSQISKSIQVDPTVIAVGGLVQVAQGVKIEQGKVASYRLPWRIIPCAQALEYDSSFLGARIFLDYLRANLIISGAFGLFKKDLVKAVGGYDTQTLGEDMELVMKLHFFCRNNNIPYR-ICYETDAVCWSQAPTNLGDLRKQRRR |
| 3CKJ Chain:A ((42-268)) | -----------------------------------------------EAAKAGRTISVVLPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAAGAR-----------------V-VS----REQALPEVPIRPGKGEALWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRRP----------------GRVTE------LVARP-LLAALRPELGCILQPLGGEYAATRELLTSV-PFAPG-YGVEIGLLVDTFDR-----LGLDAIAQVNLGVREHRNRPLAELGAMSRQV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CKJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125044 for 1691 contacts (-73.9/contact) +
2D Compatibility (PS) -21851 + (NN) -3232 + (LL) 8904
1D Compatibility (HY) -4000 + (ID) 2200
Total energy: -147423.0 ( -87.18 by residue)
QMean score : 0.373
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