Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIEITWTVKYITEFIATAFLIILGNGAVANVDL-KGTKGNNSGWIIIAIGYGLGVMMPALMFGNV-SGNHINPAFTLGLAF-SGLFPWAHVGQYILAQILGAMFGQLVVVMVYQPYFVKTENPNHVLGSFSTISALDD--GQKSSRKAAYINGFLNEFVGSFVLFFGALALTKNYFGVELVGKLVQAGYDQTTAATRISPYVTGSLAVAHLGIGFLVMTLVASLGGPTGPALNPARDLGPRIVHRLL--PKQILGQAKEDSKWWYAWVPVLAPIVASILAVALFKLLYL--- |
| 1FX8 Chain:A ((6-259)) | ----TLKGQCIAEFLGTGLLIFFGVGCVAALKVA----GASFGQWEISVIWGLGVAMAIYLTAGVS-GAHLNPAVTIALWLFAC-FDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTD-------------------------DGNGVPRGPLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVFAWLAGWGNVAFT---GGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGRHL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FX8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166393 for 2113 contacts (-78.7/contact) +
2D Compatibility (PS) -25417 + (NN) -7629 + (LL) 3076
1D Compatibility (HY) -23200 + (ID) 3700
Total energy: -223263.0 ( -105.66 by residue)
QMean score : 0.253
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