Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQGRIVKSLAGFYYVESDGVVYQTRARGNFRKKGQIPYVGDWVEFSSQDQSEGYILSIEERKNSLVRPPIVNIDQAVVIMSAKEPDFNANLL--DRFLVLLE-------YKMIQPIIYISKLDLLDDLVVIDDIREHYQNIGYVFCYSQEELL----PLLADKVTVFMGQTGVGKSTLLNKIAPELKLETGEISDSLGRGRHTTRAVSFYNVHKGKIADTPGFSSLDYEVDNAEDLNESFPELRRLSHFCKFRSCTHTHEPKCAVKEALTQGQLWQVRYDNYLQFLSEIENRRETYKKVIKRK |
4CIJ Chain:A ((3-269)) | MSG--LKPCVDWLQVTFK--------TGQDSVKKCVEKLEKVFEILGLNEAE--FLPLKNGKYGYKQGVAFQGNPVLAVYYDGADDMGIHVEMTGQGCRLFELHTSINWYELFYRLVYEYEVNITRLDVAVDDFKGYFKINTLVKKLKDDEVTSRFKKARHIENIVIEGGETIGHTLYFGAPSSDIQVRFYEKNVQMGMDIDV------WNRTEIQLRDDRAHVVAQIIADDVLPLGEIVAGL--LRNYIQFRTRKATDKNKKR----------WPL-ARFWLNFLGDVQPLRIAKQM----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CIJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57660 for 1869 contacts (-30.9/contact) +
2D Compatibility (PS) -25598 + (NN) 1497 + (LL) 3436
1D Compatibility (HY) -13200 + (ID) 2050
Total energy: -93575.0 ( -50.07 by residue)
QMean score : 0.160
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