Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQGRIVKSLAGFYYVESDGVVYQTRARGNFRKKGQIPYVGDWVEFSSQDQSEGYILSIEERKNSLVRPPIVNIDQAVVIMSAKEPDFNANLL--DRFLVLLE-------YKMIQPIIYISKLDLLDDLVVIDDIREHYQNIGYVFCYSQEELL----PLLADKVTVFMGQTGVGKSTLLNKIAPELKLETGEISDSLGRGRHTTRAVSFYNVHKGKIADTPGFSSLDYEVDNAEDLNESFPELRRLSHFCKFRSCTHTHEPKCAVKEALTQGQLWQVRYDNYLQFLSEIENRRETYKKVIKRK
4CIJ Chain:A ((3-269))MSG--LKPCVDWLQVTFK--------TGQDSVKKCVEKLEKVFEILGLNEAE--FLPLKNGKYGYKQGVAFQGNPVLAVYYDGADDMGIHVEMTGQGCRLFELHTSINWYELFYRLVYEYEVNITRLDVAVDDFKGYFKINTLVKKLKDDEVTSRFKKARHIENIVIEGGETIGHTLYFGAPSSDIQVRFYEKNVQMGMDIDV------WNRTEIQLRDDRAHVVAQIIADDVLPLGEIVAGL--LRNYIQFRTRKATDKNKKR----------WPL-ARFWLNFLGDVQPLRIAKQM-----


General information:
TITO was launched using:
RESULT:

Template: 4CIJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57660 for 1869 contacts (-30.9/contact) +
2D Compatibility (PS) -25598 + (NN) 1497 + (LL) 3436
1D Compatibility (HY) -13200 + (ID) 2050
Total energy: -93575.0 ( -50.07 by residue)
QMean score : 0.160

(partial model without unconserved sides chains):
PDB file : Tito_4CIJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CIJ-query.scw
PDB file : Tito_Scwrl_4CIJ.pdb: