Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIENYCQDYCLETIFPKHYFKDLQVITLTAGQSVCKQGEQLEYLHYIVKGRFKIVRRLFNGKEHILDIKTKPTLIGDIELLTNRQIVSSVIALEDLTVIQLSLKGRKEKLLTDATFLLKLSQELAQAFHDQNIKASTNLGYTVKELLASHILAIEEQG--------YFQLELSSLADSFGVSYRHLLRVIHDMVKEGLIQKEKPKYF-IKNRFALESLNIQP
1FT9 Chain:A ((2-213))
--PPRFNIANVLLSPDGETFFRGFRSKIHAKGSLVCTGEGDENGVFVVVDGRLRVYLV-GEEREISLFYLTSGDMFCM-------HSGCLVEATERTEVRFADIRTFEQKLQTCPSMAWGLIAILGRALTSCMRTIEDLMFHDIKQRIAGFFIDHANTTGRQTGVIVSVDFTVEEIANLIGSSRQTTSTALNSLIKEGYISRQGRGHYTIPNLVRLKAAA---
General information:
TITO was launched using:
RESULT:
Template:
1FT9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105467 for 1437 contacts (-73.4/contact) +
2D Compatibility (PS) -21969 + (NN) -7791 + (LL) 1224
1D Compatibility (HY) -5600 + (ID) 1650
Total energy: -141253.0 ( -98.30 by residue)
QMean score : 0.387
(partial model without unconserved sides chains):
PDB file :
Tito_1FT9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FT9-query.scw
PDB file :
Tito_Scwrl_1FT9.pdb
: