Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVATLIIIRGNSASGKSKIAKQLQAELGENTLLLSQDYLRREMLGTK-----DGENTTTIPLLINLLNYGYHNCSYIILEGILRSDWYTPVWKHILKHNPNNTYAYYYDLSFQETVKRHSTRLKSLEFGEDSLARWWLEKDFL-KEIPEKILTKAMSLEDVKKLIMTDVLP
3T61 Chain:A ((17-178))
-FPGSIVVMGVSGSGKSSVGEAIAEAC--GYPFIEGDALHPPENIRKMSEGIPLTDDDRWPWLAAIGE-RLASREPVVVSCSALKRSYRDKLRES---APGGLAFVFLHGSESVLAERMHHRTG-HFMPSSLLQTQLETLEDPRGEVRTVAVDVAQPLAEIVREALAGLAR
General information:
TITO was launched using:
RESULT:
Template:
3T61.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62685 for 1227 contacts (-51.1/contact) +
2D Compatibility (PS) -16384 + (NN) -5482 + (LL) 488
1D Compatibility (HY) -1200 + (ID) 1050
Total energy: -86313.0 ( -70.34 by residue)
QMean score : 0.408
(partial model without unconserved sides chains):
PDB file :
Tito_3T61.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T61-query.scw
PDB file :
Tito_Scwrl_3T61.pdb
: