Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKNELNNKLNKLKHVQVYNKIFNMIQDGTYSPGMQLPSEPELAGQLNVSRATLRKSLALLQEDHLVKNIRGKGNFIRENSSNLSENGYENRQHPIKTCLTSKITEVELEFRVEVPAEAITASLKQET-PVVVIADRWYHTDDGPLAYTLSFIPIELISDAEISLHDTKQLLNFIEEGIYQEGISSHSQSHLGYATSGNFSATKYTLSDHGQFILIQETIFKQ-EKILMCNKHYVPIEHFELSITSH |
| 2RA5 Chain:A ((68-243)) | ----------------------------------------------------------------GLLVRRR--------------------------------PATKVLVNTVVPATAEIAAALGVAEDSEVHRIERLRLTHGEPMAYLCNYLPPGLVDLDTGQ-LEATGLYRLMRA-AGITLHS--ARQSIGARAATSGEAERLGEDAGAPLLTMERTTFDDTGRAVEFGTHTYRPSRYSFEFQLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RA5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60573 for 1000 contacts (-60.6/contact) +
2D Compatibility (PS) -15589 + (NN) -2385 + (LL) 4828
1D Compatibility (HY) -3200 + (ID) 1100
Total energy: -78019.0 ( -78.02 by residue)
QMean score : 0.374
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